Dr. Michael Carlson, September 2026 Snapshot

Published September 16, 2026

Dr. Michael Carlson, an assistant professor of biological oceanography in the Biological Sciences Department, and his team of student researchers seek to better understand the balance of life and death in the oceans and critically assess ocean health. The Carlson Lab is developing the ability to detect the most important viruses, pathogens, and parasites that kill photosynthetic organisms in the oceans.

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Carlson lab researcher gathering samples of seawater
Carlson Lab researchers collect coastal seawater samples to investigate the microorganisms and pathogens living in the local marine environment.
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Dr. Michael Carlson holding a sample of seawater in the field as student researchers make observations
Fabiana Paredes and Kassandra Gutierrez examine plankton in a seawater sample collected from Alamitos Bay, Long Beach as part of their field-based research.

Half of earth's oxygen production and carbon fixation occurs in the oceans, largely mediated by billions upon billions of fast-growing photosynthetic microbes called phytoplankton. Every day, massive numbers of these microbes die, balancing their rapid growth. Once they die, marine phytoplankton become the food that sustains marine food webs.

The balance between growth and death in the oceans is changing due to anthropogenic influences, which has large implications for how matter and energy move through the marine food web. Oceanographic research is highly reliant on shipboard sample collection which limits the geographic and seasonal extent of available data and impedes the ability to assess ocean change in real-time, so the Carlson Lab is building a multi-annual and global-scale record to evaluate how long-term changes affect marine algae and their viruses. In particular, they are synthesizing and harmonizing large genomic datasets to give insight on the global-scale patterns of phytoplankton mortality. The lab then uses the data from field and laboratory research to generate models that can forecast how phytoplankton communities and their predators might respond to future ocean conditions.

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Dr. Michael Carlson and student researchers in the lab
Student researchers learn how phytoplankton cultures are maintained and used to study interactions between marine microbes and their pathogens.
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student researchers in the lab examining a culture plate
Lab members examine a multiwell culture plate used to test interactions among marine microorganisms under controlled laboratory conditions.
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Dr. Michael Carlson and student researcher using a microscope in the lab
Kayla Hoand and Dr. Carlson use microscopy to examine new marine microorganisms grown for laboratory experiments.
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Dr. Michael Carlson and student researchers having a discussion in the lab
Members of the Carlson Lab discuss counting phytoplankton cells on a flow cytometer in the lab.
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Charmaine in the lab
Charmaine Vergara examines a phytoplankton culture being maintained for laboratory experiments.
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Kassandra and Dr. Carlson in the lab
Kassandra and Dr. Carlson examine culture plates used to grow and study marine microorganisms and their pathogens.
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Robert in the lab using a microscope
Robert Garcia uses microscopy to examine marine phytoplankton while other lab members observe and discuss the results.

This information could help target regions or organisms that might be of value for conservation or further study. The Carlson Lab also fundamentally believes that understanding the ocean is a raison d'être in that it is intrinsically valuable to comprehend the vast and complex systems that govern our planet. By deepening knowledge of the oceans, the Carlson Lab not only enhances our ability to protect these ecosystems but also contributes to a broader understanding of the Earth's climate, biodiversity, and the intricate web of life that sustains humanity.

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Dr. Michael Carlson and student researchers in lab coats
Carlson Lab group: back row, left to right: Robert Garcia (‘25), Dr. Michael Carlson, and Fabiana Paredes (‘24);
front row: Kassandra Gutierrez ('25), Kayla Hoang ('24), and Charmaine Vergara ('26).